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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806668.1_cds_XP_016494470.1_8879
CDS Infomation

[gene=LOC107813693] [db_xref=GeneID:107813693] [protein=branched-chain-amino-acid aminotransferase 2, chloroplastic-like] [protein_id=XP_016494470.1] [location=join(15923..16017,16088..16259,18476..18652,19134..19265,19378..19476,19563..19679,20018..20113,20197..20309,20396..20510)] [gbkey=CDS]
Sequence

ATGGCTTCTAACCATATTGTCTCTTCATCTCAATTTGCTCTCAATTCCCACTTCTCTTCA
CCATCTCCAACTTCTTTCCAACCTTCTACTTACAGGGAATATGAGTCTGAGGAGATTGAT
TGGGATAATTTGGGATTCAAGGTTATCCCAACTGATTATATGTTTATAGCAAAAAGCTGT
TTAGATGGAATTTTTGAACCAGGACAACTAAATCCTTTTGGAAATATTCAATTGAGTCCC
GCTGCTGGAATCTTGAACTATGGACAGGGTTTAATTGAAGGCACAAAAGCGTATAGAAGA
GAAGATGGACGAATTTACTTATTCCGTCCGCAAGATAGCGCAATTCGAATGCAGATTGGT
GCTGAAAGATTGTGTATGCCTTTTCCATCCGTAGACCAATTTGTGGATGCTGTTAAGCAA
ACAGCTTTGGCTAATAAGCGTTGGATTCCTCCTGCTGGGAAAGGATCACTTTATCTTCGA
CCTCTGCTTATGGGAAGTGGAGCTGTACTTGGAGTTGCTCCAGCACCTGAATACACATTC
CTTGTCTATTCTTGTCCTGTTGGAAACTATTTCAAGGATGGAACAGGAGCACTCTCCTTA
TATGTTGAGGAAGAATTTCATCGTTCAGCCTTGGGAGGAGCTGGTGGAATCAAAAGCATT
ACTAATTATGCCCCGGTGATGAAAGCCATGAGAAATGCAAAAGGGAAAGGATTCACTGAT
GTATTGTACCTCGATTCAGTAAATAACAAATATATTGAAGAGGCCTCTTCCTCTAATATT
TTTCTAGTCAAGGGAAAAGTCATTTCAACTCCAAAGGCAAATGGAACTATTCTTGAAGGA
GTTACGAAGAAAAGTGTCATAGACATTGCACATGATCTTGGATACCAGGTCGAAGAACGC
GCGATTGAAGCAGAGGAATTGATAACAGCTGATGAAGTGTTCTGTACGGGAACTGCACTT
GGTGTTGCTGTTGTAGAAAATATTACTTACAAGGGTAAAAAGATTGAATATAAGATAAGT
TCAGAAATGATAAGCCAGCAATTGAACTCGAGGCTGGTGGGGATTCAAAGAGGCACTATT
GAGGATAAGAGGAATTGGATTGTTGAGGTTAAATGA

Peptide Sequence

PEP ID

XP_016494470.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MASNHIVSSSQFALNSHFSSPSPTSFQPSTYREYESEEIDWDNLGFKVIPTDYMFIAKSC
LDGIFEPGQLNPFGNIQLSPAAGILNYGQGLIEGTKAYRREDGRIYLFRPQDSAIRMQIG
AERLCMPFPSVDQFVDAVKQTALANKRWIPPAGKGSLYLRPLLMGSGAVLGVAPAPEYTF
LVYSCPVGNYFKDGTGALSLYVEEEFHRSALGGAGGIKSITNYAPVMKAMRNAKGKGFTD
VLYLDSVNNKYIEEASSSNIFLVKGKVISTPKANGTILEGVTKKSVIDIAHDLGYQVEER
AIEAEELITADEVFCTGTALGVAVVENITYKGKKIEYKISSEMISQQLNSRLVGIQRGTI
EDKRNWIVEVK

Transcript Sequence

Gene sequence data has not been registered.